Katherine J. Denby: search on Z-Library

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1

Addressing the threat of climate change to agriculture requires improving crop resilience to short-term abiotic stress

Beacham, Andrew M, Hand, Paul, Barker, Guy C, Denby, Katherine J, Teakle, Graham R, Walley, Peter G, Monaghan, James M

Journal:

Outlook on Agriculture

Year:

2018

Language:

english

File:

PDF, 225 KB

english, 2018

2

Bringing numerous methods for expression and promoter analysis to a public cloud computing service

Polański, Krzysztof, Gao, Bo, Mason, Sam A, Brown, Paul, Ott, Sascha, Denby, Katherine J, Wild, David L, Bar-Joseph, Ziv

Journal:

Year:

2018

Language:

english

File:

PDF, 76 KB

english, 2018

3

A constitutive PR-1::luciferase expression screen identifies Arabidopsis mutants with differential disease resistance to both biotrophic and necrotrophic pathogens

SHANE L. MURRAY, NICOLETTE ADAMS, DANIEL J. KLIEBENSTEIN, GARY J. LOAKE, KATHERINE J. DENBY

Journal:

Molecular Plant Pathology

Year:

2005

Language:

english

File:

PDF, 292 KB

english, 2005

4

Salt and osmotic stress cause rapid increases in Arabidopsis thaliana cGMP levels

Lara Donaldson, Ndiko Ludidi, Marc R Knight, Chris Gehring, Katherine Denby

Journal:

Year:

2004

Language:

english

File:

PDF, 173 KB

english, 2004

5

Modelling signaling networks underlying plant defence

Windram, Oliver, Denby, Katherine J

Journal:

Current Opinion in Plant Biology

Year:

2015

Language:

english

File:

PDF, 820 KB

english, 2015

6

Discrepancy between Knowledge and Perceptions of Dietary Omega-3 Fatty Acid Intake Compared with the Omega-3 Index

Thuppal, Sowmyanarayanan, von Schacky, Clemens, Harris, William, Sherif, Katherine, Denby, Nigel, Steinbaum, Suzanne, Haycock, Bryan, Bailey, Regan

Journal:

Year:

2017

Language:

english

File:

PDF, 676 KB

english, 2017

7

A Robust Bayesian Two-Sample Test for Detecting Intervals of Differential Gene Expression in Microarray Time Series

Stegle, Oliver, Denby, Katherine J., Cooke, Emma J., Wild, David L., Ghahramani, Zoubin, Borgwardt, Karsten M.

Journal:

Journal of Computational Biology

Year:

2010

Language:

english

File:

PDF, 2.28 MB

english, 2010

8

Harnessing diversity from ecosystems to crops to genes

Buchanan-Wollaston, Vicky, Wilson, Zoe, Tardieu, François, Beynon, Jim, Denby, Katherine

Journal:

Food and Energy Security

Year:

2017

Language:

english

File:

PDF, 464 KB

english, 2017

9

Secondary metabolites influence Arabidopsis/Botrytis interactions: variation in host production and pathogen sensitivity

Daniel J. Kliebenstein, Heather C. Rowe, Katherine J. Denby

Journal:

The Plant Journal

Year:

2005

Language:

english

File:

PDF, 194 KB

english, 2005

10

Gene-for-Gene Tolerance to Bacterial Wilt in Arabidopsis

Van der Linden, Liesl, Bredenkamp, Jane, Naidoo, Sanushka, Fouché-Weich, Joanne, Denby, Katherine J., Genin, Stephane, Marco, Yves, Berger, Dave K.

Journal:

Molecular Plant-Microbe Interactions

Year:

2013

Language:

english

File:

PDF, 625 KB

english, 2013

11

An interspecific barberry hybrid enables genetic dissection of non-host resistance to the stem rust pathogen Puccinia graminis

Bartaula, Radhika, Melo, Arthur T O, Connolly, Bryan A, Jin, Yue, Hale, Iago, Denby, Katherine

Journal:

Journal of Experimental Botany

Year:

2018

Language:

english

File:

PDF, 779 KB

english, 2018

12

Metabolomic approaches reveal that cell wall modifications play a major role in ethylene-mediated resistance against Botrytis cinerea

Amanda J. Lloyd, J. William Allwood, Catherine L. Winder, Warwick B. Dunn, James K. Heald, Simona M. Cristescu, Anushen Sivakumaran, Frans J. M. Harren, Joseph Mulema, Katherine Denby, Royston Goodacr

Journal:

The Plant Journal

Year:

2011

Language:

english

File:

PDF, 1.75 MB

english, 2011

13

Plasma membrane-associated cation-binding protein 1-like protein negatively regulates intercellular movement of BaMV

Huang, Ying-Ping, Huang, Ying-Wen, Chen, I-Hsuan, Shenkwen, Lin-Ling, Hsu, Yau-Huei, Tsai, Ching-Hsiu, Denby, Katherine

Journal:

Journal of Experimental Botany

Year:

2017

Language:

english

File:

PDF, 1.50 MB

english, 2017

14

Novel markers for high-throughput protoplast-based analyses of phytohormone signaling

Lehmann, Silke, Dominguez-Ferreras, Ana, Huang, Wei-Jie, Denby, Katherine, Ntoukakis, Vardis, SchÃ¤fer, Patrick, Wu, Keqiang

Journal:

Year:

2020

File:

PDF, 2.30 MB

2020

15

Jasmonate signalling drives time-of-day differences in susceptibility of Arabidopsis to the fungal pathogen Botrytis cinerea

Ingle, Robert A., Stoker, Claire, Stone, Wendy, Adams, Nicolette, Smith, Rob, Grant, Murray, Carré, Isabelle, Roden, Laura C., Denby, Katherine J.

Journal:

The Plant Journal

Year:

2015

Language:

english

File:

PDF, 411 KB

english, 2015

16

Whole genome resequencing of Botrytis cinerea isolates identifies high levels of standing diversity

Atwell, Susanna, Corwin, Jason A., Soltis, Nicole E., Subedy, Anushryia, Denby, Katherine J., Kliebenstein, Daniel J.

Journal:

Frontiers in Microbiology

Year:

2015

Language:

english

File:

PDF, 1.56 MB

english, 2015

17

Identification of Botrytis cinerea susceptibility loci in Arabidopsis thaliana

Katherine J. Denby, Pavan Kumar, Daniel J. Kliebenstein

Journal:

The Plant Journal

Year:

2004

Language:

english

File:

PDF, 241 KB

english, 2004

18

Basal Resistance Against Pseudomonas syringae in Arabidopsis Involves WRKY53 and a Protein with Homology to a Nematode Resistance Protein

Murray, Shane L., Ingle, Robert A., Petersen, Lindsay N., Denby, Katherine J.

Journal:

Molecular Plant-Microbe Interactions

Year:

2007

Language:

english

File:

PDF, 361 KB

english, 2007

19

PAMP recognition and the plant–pathogen arms race

Robert A. Ingle, Maryke Carstens, Katherine J. Denby

Journal:

Year:

2006

Language:

english

File:

PDF, 317 KB

english, 2006

20

Engineering drought and salinity tolerance in plants: lessons from genome-wide expression profiling in Arabidopsis

Katherine Denby, Chris Gehring

Journal:

Trends in Biotechnology

Year:

2005

Language:

english

File:

PDF, 121 KB

english, 2005

21

Downy Mildew effector HaRxL21 interacts with the transcriptional repressor TOPLESS to promote pathogen susceptibility

Harvey, Sarah, Kumari, Priyanka, Lapin, Dmitry, Griebel, Thomas, Hickman, Richard, Guo, Wenbin, Zhang, Runxuan, Parker, Jane E., Beynon, Jim, Denby, Katherine, Steinbrenner, Jens, Wang, Yuanchao

Journal:

Year:

2020

File:

PDF, 6.00 MB

2020

22

Network Modeling to Understand Plant Immunity

Windram, Oliver, Penfold, Christopher A., Denby, Katherine J.

Journal:

Annual Review of Phytopathology

Year:

2014

Language:

english

File:

PDF, 577 KB

english, 2014

23

A Molecular Signal Integration Network Underpinning Arabidopsis Seed Germination

Xu, Hao, Lantzouni, Ourania, Bruggink, Tonko, Benjamins, Rene, Lanfermeijer, Frank, Denby, Katherine, Schwechheimer, Claus, Bassel, George W.

Journal:

Current Biology

Year:

2020

File:

PDF, 3.48 MB

2020

24

Granger causality vs. dynamic Bayesian network inference: a comparative study

Cunlu Zou, Katherine J Denby, Jianfeng Feng

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 109 KB

english, 2009

25

R/BHC: fast Bayesian hierarchical clustering for microarray data

Richard S Savage, Katherine Heller, Yang Xu, Zoubin Ghahramani, William M Truman, Murray Grant, Katherine J Denby, David L Wild

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 1.03 MB

english, 2009

26

Conserved Noncoding Sequences Highlight Shared Components of Regulatory Networks in Dicotyledonous Plants

Laura Baxter, Aleksey Jironkin, Richard Hickman, Jay Moore, Christopher Barrington, Peter Krusche, Nigel P. Dyer, Vicky Buchanan-Wollaston, Alexander Tiskin, Jim Beynon, Katherine Denby and Sascha Ott

Journal:

Year:

2012

Language:

english

File:

PDF, 3.16 MB

english, 2012

27

A Framework for Engineering Stress Resilient Plants Using Genetic Feedback Control and Regulatory Network Rewiring

Foo, Mathias, Gherman, Iulia, Zhang, Peijun, Bates, Declan G., Denby, Katherine J.

Journal:

ACS Synthetic Biology

Year:

2018

Language:

english

File:

PDF, 1.97 MB

english, 2018

28

Insect Gallers and Their Plant Hosts: From Omics Data to Systems Biology

Oates, Caryn, Denby, Katherine, Myburg, Alexander, Slippers, Bernard, Naidoo, Sanushka

Journal:

International Journal of Molecular Sciences

Year:

2016

Language:

english

File:

PDF, 666 KB

english, 2016

29

A University-Based Transdisciplinary Approach to Mental Health Workforce Shortages

Hunt, Sara M., Denby, Ramona W., Hertlein, Katherine M., Lefforge, Noelle, Paul, Michelle G.

Journal:

Community Mental Health Journal

Year:

2019

Language:

english

File:

PDF, 780 KB

english, 2019

30

Spatial and temporal transcriptomic analysis of theArabidopsis thaliana–Botrytis cinereainteraction

Joseph M. K. Mulema, Katherine J. Denby

Journal:

Molecular Biology Reports

Year:

2012

Language:

english

File:

PDF, 514 KB

english, 2012

31

Insect eggâinduced physiological changes and transcriptional reprogramming leading to gall formation

Oates, Caryn N., Denby, Katherine J., Myburg, Alexander A., Slippers, Bernard, Naidoo, Sanushka

Journal:

Plant, Cell & Environment

Year:

2020

File:

PDF, 2.19 MB

2020

32

ups1, an Arabidopsis thaliana camalexin accumulation mutant defective in multiple defence signalling pathways

Katherine J. Denby, Laure J.M. Jason, Shane L. Murray, Robert L. Last

Journal:

The Plant Journal

Year:

2005

Language:

english

File:

PDF, 374 KB

english, 2005

33

Reassess the t Test: Interact with All Your Data via ANOVA

Brady, Siobhan M., Burow, Meike, Busch, Wolfgang, Carlborg, Örjan, Denby, Katherine J., Glazebrook, Jane, Hamilton, Eric S., Harmer, Stacey L., Haswell, Elizabeth S., Maloof, Julin N., Springer, Natha

Journal:

Year:

2015

Language:

english

File:

PDF, 350 KB

english, 2015

34

Drying without Dying: The Comparative Mechanisms and Evolution of Dessication Tolerance in Animals, Microbes, and Plants || The Signature of Seeds in Resurrection Plants: A Molecular and Physiological Comparison of Desiccation Tolerance in Seeds and Vegetative Tissues

Nicola Illing, Katherine J. Denby, Helen Collett, Arthur Shen and Jill M. Farrant

Journal:

Integrative and Comparative Biology

Year:

2005

Language:

english

File:

PDF, 3.02 MB

english, 2005

35

Constitutive expression of a grapevine polygalacturonase-inhibiting protein affects gene expression and cell wall properties in uninfected tobacco

Erik Alexandersson, John VW Becker, Dan Jacobson, Eric Nguema-Ona, Cobus Steyn, Katherine J Denby, Melané A Vivier

Journal:

BMC Research Notes

Year:

2011

Language:

english

File:

PDF, 763 KB

english, 2011

36

MEDIATOR25 Acts as an Integrative Hub for the Regulation of Jasmonate-Responsive Gene Expression in Arabidopsis

Volkan Çevik, Brendan N. Kidd, Peijun Zhang, Claire Hill, Steve Kiddle, Katherine J. Denby, Eric B. Holub, David M. Cahill, John M. Manners, Peer M. Schenk, Jim Beynon and Kemal Kazan

Journal:

PLANT PHYSIOLOGY

Year:

2012

Language:

english

File:

PDF, 3.19 MB

english, 2012

37

Perceptions of a Healthy Diet

Bailey, Regan L., Denby, Nigel, Haycock, Bryan, Sherif, Katherine, Steinbaum, Suzanne, von Schacky, Clemens

Journal:

Nutrition Today

Year:

2015

Language:

english

File:

PDF, 936 KB

english, 2015

38

Control Strategies for Mitigating the Effect of External Perturbations on Gene Regulatory Networks

Foo, Mathias, Gherman, Iulia, Denby, Katherine J., Bates, Declan G.

Journal:

IFAC-PapersOnLine

Year:

2017

Language:

english

File:

PDF, 543 KB

english, 2017

39

Towards transcript profiling of desiccation tolerance in Xerophyta humilis: Construction of a normalized 11 k X. humilis cDNA set and microarray expression analysis of 424 cDNAs in response to dehydration

Helen Collett, Arthur Shen, Michael Gardner, Jill M Farrant, Katherine J. Denby, Nicola Illing

Journal:

Physiologia Plantarum

Year:

2004

Language:

english

File:

PDF, 1.46 MB

english, 2004

40

Carbon Catabolite Repression Regulates Glyoxylate Cycle Gene Expression in Cucumber

Ian A. Graham, Katherine J. Denby and Christopher J. Leaver

Journal:

Year:

1994

Language:

english

File:

PDF, 2.05 MB

english, 1994

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